ok well your able to rol the window up and downwhen power is on right?
all accords when you turn the key off and the doors are still shut you should be able to roll the windows up and down untill you open the door,so your saying even with the keys out and the doors open you where able to roll the window up and down? also you might have the option of sticking the key in the key hole and is able to rols the window up and down like the VW,
but try to turn the car on then close the door turn key off take key out and roll the wndow up and down if that work then i dont see a problem and if the work reg then there isnt a problem. but check the (if you have an aftermarket alarm if you have one if not there isnt a problem and see what sparked under the dash. i dont think there is anything under the dash that has to do with the windows the motor is in the door and the relay